Binding of distinct substrate conformations enables hydroxylation of remote sites in thaxtomin D by cytochrome P450 TxtC Lona M. Alkhalaf, Sarah Barry, Dean Rea, Angelo Gallo, Daniel Griffiths, Jozef Lewandowski, Vilmos Fulop, Gregory L. Challis
Journal Of The American Chemical Society, Dec 2018 DOI: 10.1021/jacs.8b08864 Iterative design and optimization of initially inactive Proteolysis Targeting Chimeras (PROTACs) identify VZ185 as a potent, fast and selective von Hippel-Lindau (VHL)-based dual degrader probe of BRD9 and BRD7 Vittoria Zoppi, Scott J. Hughes, Chiara Maniaci, Andrea Testa, Teresa Gmaschitz, Corinna Wieshofer, Manfred Koegl, Kristin Riching, Danette L. Daniels, Andrea Spallarossa, Alessio Ciulli
Journal Of Medicinal Chemistry, Dec 2018 DOI: 10.1021/acs.jmedchem.8b01413 Journal Paper I24-Microfocus Macromolecular Crystallography open access Ferredoxin-linked flavoenzyme defines a family of pyridine nucleotide-independent thioredoxin reductases Ruben M. Buey, David Fernandez-Justel, Jose M. De Pereda, José L. Revuelta, Peter Schürmann, Bob B. Buchanan, Monica Balsera
Proceedings Of The National Academy Of Sciences, 239 Dec 2018 DOI: 10.1073/pnas.1812781115 Journal Paper B21-High Throughput SAXS I24-Microfocus Macromolecular Crystallography Interactome rewiring following pharmacological targeting of BET bromodomains Jean-Philippe Lambert, Sarah Picaud, Takao Fujisawa, Huayun Hou, Pavel Savitsky, Liis Uusküla-Reimand, Gagan D. Gupta, Hala Abdouni, Zhen-Yuan Lin, Monika Tucholska, James D. R. Knight, Beatriz Gonzalez-Badillo, Nicole St-Denis, Joseph A. Newman, Manuel Stucki, Laurence Pelletier, Nuno Bandeira, Michael D. Wilson, Panagis Filippakopoulos, Anne-Claude Gingras
Molecular Cell, Dec 2018 DOI: 10.1016/j.molcel.2018.11.006 Journal Paper B21-High Throughput SAXS I02-Macromolecular Crystallography I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access qFit-ligand reveals widespread conformational heterogeneity of drug-like molecules in X-ray electron density maps Gydo C. P. Van Zundert, Brandi M. Hudson, Saulo H. P. De Oliveira, Daniel Keedy, Rasmus Fonseca, Amelie Heliou, Pooja Suresh, Kenneth Borrelli, Tyler Day, James Fraser, Henry Van Den Bedem
Journal Of Medicinal Chemistry, Dec 2018 DOI: 10.1021/acs.jmedchem.8b01292 Journal Paper I03-Macromolecular Crystallography I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography The molecular mechanism of transport by the mitochondrial ADP/ATP carrier Jonathan J. Ruprecht, Martin S. King, Thomas Zogg, Antoniya A. Aleksandrova, Els Pardon, Paul G. Crichton, Jan Steyaert, Edmund R. S. Kunji
Cell, Dec 2018 DOI: 10.1016/j.cell.2018.11.025 Journal Paper I24-Microfocus Macromolecular Crystallography open access Preacinetobactin not acinetobactin is essential for iron uptake by the BauA transporter of the pathogen Acinetobacter baumannii Lucile Moynie, Ilaria Serra, Mariano A. Scorciapino, Emilia Oueis, Malcolm G. P. Page, Matteo Ceccarelli, James Naismith
Elife, 7 Dec 2018 DOI: 10.7554/eLife.42270 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43 Letícia Maria Zanphorlin, Mariana Abrahão Bueno De Morais, José Alberto Diogo, Mariane Noronha Domingues, Flávio Henrique Moreira De Souza, Roberto Ruller, Mario Murakami
Biotechnology And Bioengineering, Dec 2018 DOI: 10.1002/bit.26899 Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography Ali Ebrahim, Martin V. Appleby, Danny Axford, John Beale, Tadeo Moreno-Chicano, Darren A. Sherrell, Richard W. Strange, Michael A. Hough, Robin L. Owen
Acta Crystallographica Section D Structural Biology, 75 Nov 2018 DOI: 10.1107/S2059798318010240 Journal Paper I24-Microfocus Macromolecular Crystallography open access Structures of DPAGT1 explain glycosylation disease mechanisms and advance TB antibiotic design Yin Yao Dong, Hua Wang, Ashley C. W. Pike, Stephen A. Cochrane, Sadra Hamedzadeh, Filip J. Wyszyński, Simon R. Bushell, Sylvain F. Royer, David A. Widdick, Andaleeb Sajid, Helena I. Boshoff, Yumi Park, Ricardo Lucas, Wei-Min Liu, Seung Seo Lee, Takuya Machida, Leanne Minall, Shahid Mehmood, Katsiaryna Belaya, Wei-Wei Liu, Amy Chu, Leela Shrestha, Shubhashish M. M. Mukhopadhyay, Claire Strain-Damerell, Rod Chalk, Nicola A. Burgess-Brown, Mervyn J. Bibb, Clifton E. Barry, Carol V. Robinson, David Beeson, Benjamin G. Davis, Elizabeth P. Carpenter
Cell, 175 Nov 2018 DOI: 10.1016/j.cell.2018.10.037 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation Alan Cartmell, Jose Muñoz-Muñoz, Jonathon A. Briggs, Didier A. Ndeh, Elisabeth C. Lowe, Arnaud Basle, Nicolas Terrapon, Katherine Stott, Tiaan Heunis, Joe Gray, Li Yu, Paul Dupree, Pearl Z. Fernandes, Sayali Shah, Spencer J. Williams, Aurore Labourel, Matthias Trost, Bernard Henrissat, Harry J. Gilbert
Nature Microbiology, 3 Nov 2018 DOI: 10.1038/s41564-018-0258-8 Journal Paper I02-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography Structural insights into the function of type VI secretion system TssA subunits Samuel R. Dix, Hayley J. Owen, Ruyue Sun, Asma Ahmad, Sravanthi Shastri, Helena L. Spiewak, Daniel J. Mosby, Matthew J. Harris, Sarah L. Batters, Thomas A. Brooker, Svetomir B. Tzokov, Svetlana E. Sedelnikova, Patrick J. Baker, Per A. Bullough, David W. Rice, Mark S. Thomas
Nature Communications, 9 Nov 2018 DOI: 10.1038/s41467-018-07247-1 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Crystal structures of VIM-1 complexes explain active site heterogeneity in VIM-class metallo-β-lactamases Ramya Salimraj, Philip Hinchliffe, Magda Kosmopoulou, Jonathan M. Tyrrell, Jurgen Brem, Sander S. Van Berkel, Anil Verma, Raymond J. Owens, Michael A. Mcdonough, Timothy R. Walsh, Christopher J. Schofield, James Spencer
The Febs Journal, Nov 2018 DOI: 10.1111/febs.14695 Journal Paper I02-Macromolecular Crystallography I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Small-molecule inhibitor of OGG1 suppresses proinflammatory gene expression and inflammation Torkild Visnes, Armando Cázares-Körner, Wenjing Hao, Olov Wallner, Geoffrey Masuyer, Olga Loseva, Oliver Mortusewicz, Elisée Wiita, Antonio Sarno, Aleksandr Manoilov, Juan Astorga-Wells, Ann-Sofie Jemth, Lang Pan, Kumar Sanjiv, Stella Karsten, Camilla Gokturk, Maurice Grube, Evert J. Homan, Bishoy M. F. Hanna, Cynthia B. J. Paulin, Therese Pham, Azita Rasti, Ulrika Warpman Berglund, Catharina Von Nicolai, Carlos Benitez-Buelga, Tobias Koolmeister, Dag Ivanic, Petar Iliev, Martin Scobie, Hans E. Krokan, Pawel Baranczewski, Per Artursson, Mikael Altun, Annika Jenmalm Jensen, Christina Kalderén, Xueqing Ba, Roman A. Zubarev, Pal Stenmark, Istvan Boldogh, Thomas Helleday
Science, 362 Nov 2018 DOI: 10.1126/science.aar8048 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Balancing specificity and promiscuity in enzyme evolution: multidimensional activity transitions in the alkaline phosphatase superfamily Bert Van Loo, Christopher D. Bayer, Gerhard Fischer, Stefanie Jonas, Eugene Valkov, Mark F. Mohamed, Anastassia Vorobieva, Celine Dutruel, Marko Hyvonen, Florian Hollfelder
Journal Of The American Chemical Society, Nov 2018 DOI: 10.1021/jacs.8b10290 Differences in the conformational energy landscape of CDK1 and CDK2 suggest a mechanism for achieving selective CDK inhibition Daniel J. Wood, Svitlana Korolchuk, Natalie J. Tatum, Lan-Zhen Wang, Jane A. Endicott, Martin E. M. Noble, Mathew P. Martin
Cell Chemical Biology, Nov 2018 DOI: 10.1016/j.chembiol.2018.10.015 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access (ADP-ribosyl)hydrolases: structural basis for differential substrate recognition and inhibition Johannes Gregor Matthias Rack, Antonio Ariza, Bryon S. Drown, Callum Henfrey, Edward Bartlett, Tomohiro Shirai, Paul J. Hergenrother, Ivan Ahel
Cell Chemical Biology, Nov 2018 DOI: 10.1016/j.chembiol.2018.11.001 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structural basis of H+-dependent conformational change in a bacterial MATE transporter Tsukasa Kusakizako, Derek P. Claxton, Yoshi Tanaka, Andrés D. Maturana, Teruo Kuroda, Ryuichiro Ishitani, Hassane S. Mchaourab, Osamu Nureki
Structure, Nov 2018 DOI: 10.1016/j.str.2018.10.004 The Leishmania PABP1–eIF4E4 interface: a novel 5′–3′ interaction architecture for trans-spliced mRNAs Fabio Henrique Dos Santos Rodrigues, Helena Firczuk, Alexander L. Breeze, Alexander D. Cameron, Martin Walko, Nilson I. T. Zanchin, John E. G. Mccarthy
Nucleic Acids Research, Nov 2018 DOI: 10.1093/nar/gky1187 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2 sensing Brandán Pedre, David Young, Daniel Charlier, Álvaro Mourenza, Leonardo Astolfi Rosado, Laura Marcos-Pascual, Khadija Wahni, Edo Martens, Alfonso G. De La Rubia, Vsevolod V. Belousov, Luis M. Mateos, Joris Messens
Proceedings Of The National Academy Of Sciences, 24 Nov 2018 DOI: 10.1073/pnas.1807954115 Journal Paper I24-Microfocus Macromolecular Crystallography open access A potent and selective PARP11 inhibitor suggests coupling between cellular localization and catalytic activity Ilsa T. Kirby, Ana Kojic, Moriah R. Arnold, Ann-Gerd Thorsell, Tobias Karlberg, Anke Vermehren-Schmaedick, Raashi Sreenivasan, Carsten Schultz, Herwig Schüler, Michael S. Cohen
Cell Chemical Biology, Oct 2018 DOI: 10.1016/j.chembiol.2018.09.011 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography Maintaining and breaking symmetry in homomeric coiled-coil assemblies Guto G. Rhys, Christopher W. Wood, Eric J. M. Lang, Adrian J. Mulholland, R. Leo Brady, Andrew R. Thomson, Derek N. Woolfson
Nature Communications, 9 Oct 2018 DOI: 10.1038/s41467-018-06391-y Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Aster proteins facilitate nonvesicular plasma membrane to ER cholesterol transport in mammalian cells Jaspreet Sandhu, Shiqian Li, Louise Fairall, Simon G. Pfisterer, Jennifer E. Gurnett, Xu Xiao, Thomas A. Weston, Dipti Vashi, Alessandra Ferrari, Jose L. Orozco, Celine L. Hartman, David Strugatsky, Stephen D. Lee, Cuiwen He, Cynthia Hong, Haibo Jiang, Laurent A. Bentolila, Alberto T. Gatta, Tim P. Levine, Annie Ferng, Richard Lee, David A. Ford, Stephen G. Young, Elina Ikonen, John Schwabe, Peter Tontonoz
Cell, Oct 2018 DOI: 10.1016/j.cell.2018.08.033 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography Non-equivalence of second sphere ‘non-catalytic’ residues in pentaerythritol tetranitrate reductase in relation to local dynamics linked to H-transfer in reactions with NADH and NADPH coenzymes Andreea I. Iorgu, Nicola J. Baxter, Matthew J. Cliff, Colin Levy, Jonathan P. Waltho, Sam Hay, Nigel S. Scrutton
Acs Catalysis, Oct 2018 DOI: 10.1021/acscatal.8b02810 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structural basis for recognition and repair of the 3′-phosphate by NExo, a base excision DNA repair nuclease from Neisseria meningitidis Jan Silhan, Qiyuan Zhao, Evzen Boura, Hellen Thomson, Andreas Forster, Christoph M. Tang, Paul S. Freemont, Geoff S. Baldwin
Nucleic Acids Research, 39 Oct 2018 DOI: 10.1093/nar/gky934 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access Holliday junctions formed from human telomeric DNA Shozeb Haider, Pengfei Li, Soraia Khiali, Deeksha Munnur, Arvind Ramanathan, Gary N. Parkinson
Journal Of The American Chemical Society, Oct 2018 DOI: 10.1021/jacs.8b08699 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens Vivek Srinivas, Hugo Lebrette, Daniel Lundin, Yuri Kutin, Margareta Sahlin, Michael Lerche, Jürgen Eirich, Rui M. M. Branca, Nicholas Cox, Britt-Marie Sjöberg, Martin Högbom
Nature, 47 Oct 2018 DOI: 10.1038/s41586-018-0653-6 Journal Paper B21-High Throughput SAXS I24-Microfocus Macromolecular Crystallography The quaternary structure of Thermus thermophilus aldehyde dehydrogenase is stabilized by an evolutionary distinct C-terminal arm extension Kevin Hayes, Mohamed Noor, Ahmed Djeghader, Patricia Armshaw, Tony Pembroke, Syed Tofail, Tewfik Soulimane
Scientific Reports, 8 Sept 2018 DOI: 10.1038/s41598-018-31724-8 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Insights into kinesin-1 activation from the crystal structure of KLC2 bound to JIP3 Joseph J. B. Cockburn, Sophie J. Hesketh, Peter Mulhair, Maren Thomsen, Mary J. O'Connell, Michael Way
Structure, Sept 2018 DOI: 10.1016/j.str.2018.07.011 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33 Javier Abellon-Ruiz, Michael Zahn, Arnaud Basle, Bert Van Den Berg
Acta Crystallographica Section D Structural Biology, 74 Sept 2018 DOI: 10.1107/S205979831800904X Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Structures of insect Imp-L2 suggest an alternative strategy for regulating the bioavailability of insulin-like hormones Nikolaj Kulahin Roed, Cristina M. Viola, Ole Kristensen, Gerd Schluckebier, Mathias Norrman, Waseem Sajid, John D. Wade, Asser Sloth Andersen, Claus Kristensen, Timothy R. Ganderton, Johan P. Turkenburg, Pierre De Meyts, Andrzej M. Brzozowski
Nature Communications, 9 Sept 2018 DOI: 10.1038/s41467-018-06192-3 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1 Yijin Liu, Alasdair D. J. Freeman, Anne-Cécile Déclais, David M. J. Lilley
Nucleic Acids Research, 5 Sept 2018 DOI: 10.1093/nar/gky863 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Probing the role of Arg97 in Heat shock protein 90 N-terminal domain from the parasite Leishmania braziliensis through site-directed mutagenesis on the human counterpart Giusy Tassone, Stefano Mangani, Maurizio Botta, Cecilia Pozzi
Biochimica Et Biophysica Acta (bba) - Proteins And Proteomics, Sept 2018 DOI: 10.1016/j.bbapap.2018.09.005 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Substrate recognition and autoinhibition in the central ribonuclease RNase E Katarzyna J. Bandyra, Joanna M. Wandzik, Ben F. Luisi
Molecular Cell, Sept 2018 DOI: 10.1016/j.molcel.2018.08.039 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Pathogen-derived HLA-E bound epitopes reveal broad primary anchor pocket tolerability and conformationally malleable peptide binding Lucy C. Walters, Karl Harlos, Simon Brackenridge, Daniel Rozbesky, Jordan R. Barrett, Vitul Jain, Thomas S. Walter, Chris A. O’callaghan, Persephone Borrow, Mireille Toebes, Scott G. Hansen, Jonah Sacha, Shaheed Abdulhaqq, Justin M. Greene, Klaus Früh, Emily Marshall, Louis J. Picker, E. Yvonne Jones, Andrew J. Mcmichael, Geraldine M. Gillespie
Nature Communications, 9 Aug 2018 DOI: 10.1038/s41467-018-05459-z Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access A key role for the periplasmic PfeE esterase in iron acquisition via the siderophore Enterobactin in Pseudomonas aeruginosa Quentin Perraud, Lucile Moynie, Véronique Gasser, Mathilde Munier, Julien Godet, Françoise Hoegy, Yves Mély, Gaëtan L. A. Mislin, James H. Naismith, Isabelle J. Schalk
Acs Chemical Biology, Aug 2018 DOI: 10.1021/acschembio.8b00543 Roles of distal aspartate and arginine of B-class dye-decolorizing peroxidase in heterolytic hydrogen peroxide cleavage Vera Pfanzagl, Kevin Nys, Marzia Bellei, Hanna Michlits, Georg Mlynek, Gianantonio Battistuzzi, Kristina Djinovic-Carugo, Sabine Van Doorslaer, Paul G. Furtmüller, Stefan Hofbauer, Christian Obinger
Journal Of Biological Chemistry, Aug 2018 DOI: 10.1074/jbc.RA118.004773 Journal Paper I24-Microfocus Macromolecular Crystallography open access Crystal structures of Z–Gly–Aib–O−·0.5Ca2+·H2O and Z–Gly–Aib–OH Renate Gessmann, Hans Brückner, Kyriacos Petratos
Acta Crystallographica Section E Crystallographic Communications, 74 Aug 2018 DOI: 10.1107/S2056989018010745 Journal Paper I24-Microfocus Macromolecular Crystallography open access Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1 Lennart Wirthmueller, Shuta Asai, Ghanasyam Rallapalli, Jan Sklenar, Georgina Fabro, Dae Sung Kim, Ruth Lintermann, Pinja Jaspers, Michael Wrzaczek, Jaakko Kangasjärvi, Daniel Maclean, Frank L. H. Menke, Mark J. Banfield, Jonathan D. G. Jones
New Phytologist, 220 Aug 2018 DOI: 10.1111/nph.15277 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structural basis of cross-reactivity of anti-citrullinated protein antibodies Changrong Ge, Bingze Xu, Bibo Liang, Erik Lönnblom, Susanna L. Lundström, Roman A. Zubarev, Burcu Ayoglu, Peter Nilsson, Thomas Skogh, Alf Kastbom, Vivianne Malmström, Lars Klareskog, René E. M. Toes, Theo Rispens, Doreen Dobritzsch, Rikard Holmdahl
Arthritis & Rheumatology, Aug 2018 DOI: 10.1002/art.40698 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Studying the mechanism and action of Purine biosynthesis enzymes in Mycobacterium Tuberculosis H37RV Samah Almehmadi
Aug 2018 Thesis I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography
Mechanistic exploitation of a self-repairing, blocked proton transfer pathway in an O2-tolerant [NiFe]-hydrogenase Rhiannon M. Evans, Philip A. Ash, Stephen E. Beaton, Emily J. Brooke, Kylie A. Vincent, Stephen B. Carr, Fraser A. Armstrong
Journal Of The American Chemical Society, Aug 2018 DOI: 10.1021/jacs.8b04798 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds Haigang Song, Niels S. Van Der Velden, Sally L. Shiran, Patrick Bleiziffer, Christina Zach, Ramon Sieber, Aman S. Imani, Florian Krausbeck, Markus Aebi, Michael F. Freeman, Sereina Riniker, Markus Künzler, James H. Naismith
Science Advances, 4 Aug 2018 DOI: 10.1126/sciadv.aat2720 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access An aspartate-specific solute-binding protein regulates protein kinase G activity to control glutamate metabolism in mycobacteria Nabanita Bhattacharyya, Irene Nailain Nkumama, Zaccheus Newland-Smith, Li-Ying Lin, Wen Yin, Rebecca E. Cullen, Jack S. Griffiths, Alexander R. Jarvis, Michael J. Price, Pei Ying Chong, Russell Wallis, Helen O'Hare
Mbio, 9 Jul 2018 DOI: 10.1128/mBio.00931-18 Journal Paper I03-Macromolecular Crystallography I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset Charlotte M. Miton, Stefanie Jonas, Gerhard Fischer, Fernanda Duarte, Mark F. Mohamed, Bert Van Loo, Bálint Kintses, Shina C. L. Kamerlin, Nobuhiko Tokuriki, Marko Hyvonen, Florian Hollfelder
Proceedings Of The National Academy Of Sciences, 47 Jul 2018 DOI: 10.1073/pnas.1607817115 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Structure–function analyses of the bacterial zinc metalloprotease effector protein GtgA uncovers key residues required for deactivating NF-κB Elliott Jennings, Diego Esposito, Katrin Rittinger, Teresa L. M. Thurston
Journal Of Biological Chemistry, Jul 2018 DOI: 10.1074/jbc.RA118.004255 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Surface probing by fragment-based screening and computational methods identifies ligandable pockets on the von Hippel-Lindau (VHL) E3 ubiquitin ligase Xavier Lucas, Inge Van Molle, Alessio Ciulli
Journal Of Medicinal Chemistry, Jul 2018 DOI: 10.1021/acs.jmedchem.8b00842 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Stereo- and regioselectivity in catalyzed transformation of a 1,2-disubstituted vicinal diol and the corresponding diketone by wild type and laboratory evolved alcohol dehydrogenases Dirk Maurer, Thilak Reddy Enugala, Emil Hamnevik, Paul Bauer, Malin Lüking, Dušan Petrović, Heidi Hillier, Shina C. L. Kamerlin, Doreen Dobritzsch, Mikael Widersten
Acs Catalysis, Jul 2018 DOI: 10.1021/acscatal.8b01762 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Trapping of the transport-segment DNA by the ATPase domains of a type II topoisomerase Ivan Laponogov, Xiao-Su Pan, Dennis A. Veselkov, Galyna B. Skamrova, Trishant R. Umrekar, L. Mark Fisher, Mark Sanderson
Nature Communications, 9 Jul 2018 DOI: 10.1038/s41467-018-05005-x Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Hepatitis A virus capsid structure David I. Stuart, Jingshan Ren, Xiangxi Wang, Zihe Rao, Elizabeth E. Fry
Cold Spring Harbor Perspectives In Medicine, Jul 2018 DOI: 10.1101/cshperspect.a031807 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Structural basis of malodour precursor transport in the human axilla Gurdeep S. Minhas, Daniel Bawdon, Reyme Herman, Michelle Rudden, Andrew P Stone, A Gordon James, Gavin H. Thomas, Simon Newstead
Elife, 7 Jul 2018 DOI: 10.7554/eLife.34995 Journal Paper I24-Microfocus Macromolecular Crystallography open access Mechanism of parkin activation by PINK1 Christina Gladkova, Sarah Maslen, J. Mark Skehel, David Komander
Nature, June 2018 DOI: 10.1038/s41586-018-0224-x Enzyme catalysis captured using multiple structures from one crystal at varying temperatures Sam Horrell, Demet Kekilli, Kakali Sen, Robin L. Owen, Florian S. N. Dworkowski, Svetlana V. Antonyuk, Thomas W. Keal, Chin W. Yong, Robert R. Eady, S. Samar Hasnain, Richard W. Strange, Mike Hough
Iucrj, 5 May 2018 DOI: 10.1107/S205225251800386X Journal Paper I24-Microfocus Macromolecular Crystallography open access Catalytic and anticatalytic snapshots of a short-form ATP phosphoribosyltransferase Magnus S. Alphey, Gemma Fisher, Ying Ge, Eoin R. Gould, Teresa Guerreiro Machado, Huanting Liu, Gordon J. Florence, James H. Naismith, Rafael Guimaraes Da Silva
Acs Catalysis, May 2018 DOI: 10.1021/acscatal.8b00867 BET bromodomain ligands: Probing the WPF shelf to improve BRD4 bromodomain affinity and metabolic stability Laura E. Jennings, Matthias Schiedel, David S. Hewings, Sarah Picaud, Corentine M. C. Laurin, Paul A. Bruno, Joseph P. Bluck, Amy R. Scorah, Larissa See, Jessica K. Reynolds, Mustafa Moroglu, Ishna N. Mistry, Amy Hicks, Pavel Guzanov, James Clayton, Charles N. G. Evans, Giulia Stazi, Philip C. Biggin, Anna K. Mapp, Ester M. Hammond, Philip G. Humphreys, Panagis Filippakopoulos, Stuart J. Conway
Bioorganic & Medicinal Chemistry, May 2018 DOI: 10.1016/j.bmc.2018.05.003 Journal Paper I24-Microfocus Macromolecular Crystallography open access Structural and functional determination of homologs of the Mycobacterium tuberculosis N -acetylglucosamine-6-phosphate deacetylase (NagA) Mohd Syed Ahangar, Christopher M. Furze, Collette S. Guy, Charlotte Cooper, Kathryn S. Maskew, Ben Graham, Alexander D. Cameron, Elizabeth Fullam
Journal Of Biological Chemistry, May 2018 DOI: 10.1074/jbc.RA118.002597 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access X-ray crystal structures of the type IVb secretion system DotB ATPases Marie Prevost, Gabriel Waksman
Protein Science, May 2018 DOI: 10.1002/pro.3439 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Novel non-ATP competitive small molecules targeting the CK2 α/β interface Paul Brear, Andrew North, Jessica Iegre, Kathy Hadje Georgiou, Alexandra Lubin, Laura Carro, William Green, Hannah F. Sore, Marko Hyvonen, David R. Spring
Bioorganic & Medicinal Chemistry, May 2018 DOI: 10.1016/j.bmc.2018.05.011 Journal Paper I24-Microfocus Macromolecular Crystallography open access Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+ site Weixiao Yuan Wahlgren, Elin Dunevall, Rachel A. North, Aviv Paz, Mariafrancesca Scalise, Paola Bisignano, Johan Bengtsson-Palme, Parveen Goyal, Elin Claesson, Rhawnie Caing-Carlsson, Rebecka Andersson, Konstantinos Beis, Ulf J. Nilsson, Anne Farewell, Lorena Pochini, Cesare Indiveri, Michael Grabe, Renwick C. J. Dobson, Jeff Abramson, Sneha Ramaswamy, Rosmarie Friemann
Nature Communications, 9 May 2018 DOI: 10.1038/s41467-018-04045-7 Journal Paper I24-Microfocus Macromolecular Crystallography open access The C-terminal extension landscape of naturally presented HLA-I ligands Philippe Guillaume, Sarah Picaud, Petra Baumgaertner, Nicole Montandon, Julien Schmidt, Daniel E. Speiser, George Coukos, Michal Bassani-Sternberg, Panagis Filippakopoulos, David Gfeller
Proceedings Of The National Academy Of Sciences, 115 May 2018 DOI: 10.1073/pnas.1717277115 Structures of ebolavirus glycoprotein complexes with tricyclic antidepressant and antipsychotic drugs Yuguang Zhao, Jingshan Ren, Elizabeth E. Fry, Julia Xiao, Alain R. Townsend, David I. Stuart
Journal Of Medicinal Chemistry, May 2018 DOI: 10.1021/acs.jmedchem.8b00350 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor Meng Yuan, Iain W. Mcnae, Yiyuan Chen, Elizabeth A. Blackburn, Martin A. Wear, Paul A. M. Michels, Linda A. Fothergill-Gilmore, Ted Hupp, Malcolm D. Walkinshaw
Biochemical Journal, May 2018 DOI: 10.1042/BCJ20180171 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access Synthesis and profiling of a 3-aminopyridin-2-one-based kinase targeted fragment library: Identification of 3-amino-5-(pyridin-4-yl)pyridin-2( 1H )-one scaffold for monopolar spindle 1 (MPS1) and Aurora kinases inhibition Daren Fearon, Isaac M. Westwood, Rob L. M. Van Montfort, Richard Bayliss, Keith Jones, Vassilios Bavetsias
Bioorganic & Medicinal Chemistry, Apr 2018 DOI: 10.1016/j.bmc.2018.04.033 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Unusual constriction zones in the major porins OmpU and OmpT from Vibrio cholerae Monisha Pathania, Silvia Acosta-Gutierrez, Satya Pratyusha Bhamidimarri, Arnaud Basle, Mathias Winterhalter, Matteo Ceccarelli, Bert Van Den Berg
Structure, Apr 2018 DOI: 10.1016/j.str.2018.03.010 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Cloning, purification and structure determination of the HIV integrase-binding domain of lens epithelium-derived growth factor Clare Hannon, Abimael Cruz-Migoni, Olga Platonova, Robin L. Owen, Joanne E. Nettleship, Ami Miller, Stephen B. Carr, Gemma Harris, Terence H. Rabbitts, Simon E. V. Phillips
Acta Crystallographica Section F Structural Biology Communications, 74 Mar 2018 DOI: 10.1107/S2053230X18001553 Journal Paper I24-Microfocus Macromolecular Crystallography open access Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures Alice E. Parnell, Silja Mordhorst, Florian Kemper, Mariacarmela Giurrandino, Josh P. Prince, Nikola J. Schwarzer, Alexandre Hofer, Daniel Wohlwend, Henning J. Jessen, Stefan Gerhardt, Oliver Einsle, Petra C. F. Oyston, Jennifer N. Andexer, Peter L. Roach
Proceedings Of The National Academy Of Sciences, 265 Mar 2018 DOI: 10.1073/pnas.1710741115 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Structural basis for the specific neutralization of Stx2a with a camelid single domain antibody fragment Robert Alvin Bernedo-Navarro, Ema Romão, Tomomasa Yano, Joar Pinto, Henri De Greve, Yann G.-J. Sterckx, Serge Muyldermans
Toxins, 10 Mar 2018 DOI: 10.3390/toxins10030108 Journal Paper I24-Microfocus Macromolecular Crystallography open access Structures of monomeric and oligomeric forms of the Toxoplasma gondii perforin-like protein 1 Tao Ni, Sophie I. Williams, Saša Rezelj, Gregor Anderluh, Karl Harlos, Phillip J. Stansfeld, Robert J. C. Gilbert
Science Advances, 4 Mar 2018 DOI: 10.1126/sciadv.aaq0762 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Targeting ligandable pockets on PHD zinc finger domains by a fragment-based approach Anastasia Amato, Xavier Lucas, Alessio Bortoluzzi, David Wright, Alessio Ciulli
Acs Chemical Biology, Mar 2018 DOI: 10.1021/acschembio.7b01093 Journal Paper I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access Crystal structure of undecaprenyl-pyrophosphate phosphatase and its role in peptidoglycan biosynthesis Meriem El Ghachi, Nicole Howe, Chia-Ying Huang, Vincent Olieric, Rangana Warshamanage, Thierry Touzé, Dietmar Weichert, Phillip J. Stansfeld, Meitian Wang, Fred Kerff, Martin Caffrey
Nature Communications, 9 Mar 2018 DOI: 10.1038/s41467-018-03477-5 Journal Paper I24-Microfocus Macromolecular Crystallography open access The partial dissociation of MHC class I bound peptides exposes their N terminus to trimming by endoplasmic reticulum aminopeptidase 1 Athanasios Papakyriakou, Emma Reeves, Mary Beton, Halina Mikolajek, Leon Douglas, Grace Cooper, Tim Elliott, Jörn M. Werner, Edward James
Journal Of Biological Chemistry, Mar 2018 DOI: 10.1074/jbc.RA117.000313 Journal Paper I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Halogen-aromatic π-interactions modulate inhibitor residence time Christina Heroven, Victoria Georgi, Gaurav K. Ganotra, Paul E. Brennan, Finn Wolfreys, Rebecca C. Wade, Amaury E. Fernández-Montalván, Apirat Chaikuad, Stefan Knapp
Angewandte Chemie International Edition, Mar 2018 DOI: 10.1002/anie.201801666 Journal Paper I02-Macromolecular Crystallography I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors Ariel Talavera, Jelle Hendrix, Wim Versees, Dukas Jurėnas, Katleen Van Nerom, Niels Vandenberk, Ranjan Kumar Singh, Albert Konijnenberg, Steven De Gieter, Daniel Castro-Roa, Anders Barth, Henri De Greve, Frank Sobott, Johan Hofkens, Nikolay Zenkin, Remy Loris, Abel Garcia-Pino
Science Advances, 4 Mar 2018 DOI: 10.1126/sciadv.aap9714 Journal Paper I24-Microfocus Macromolecular Crystallography open access Conformational flexibility of proteins involved in ribosome biogenesis: investigations via Small Angle X-Ray Scattering (SAXS) Dritan Siliqi, James Foadi, Marco Mazzorana, Davide Altamura, Alfonso Méndez-Godoy, Nuria Sánchez-Puig
Crystals, 8 Feb 2018 DOI: 10.3390/cryst8030109 Journal Paper B21-High Throughput SAXS I24-Microfocus Macromolecular Crystallography open access Structural basis for amino acid transport by the CAT family of SLC7 transporters Katharina E. J. Jungnickel, Joanne Parker, Simon Newstead
Nature Communications, 9 Feb 2018 DOI: 10.1038/s41467-018-03066-6 Journal Paper I23-Long wavelength MX I24-Microfocus Macromolecular Crystallography open access Legionella DotM structure reveals a role in effector recruiting to the Type 4B secretion system Amit Meir, David Chetrit, Luying Liu, Craig R. Roy, Gabriel Waksman
Nature Communications, 9 Feb 2018 DOI: 10.1038/s41467-017-02578-x Journal Paper I02-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Crystal structures of sampatrilat and sampatrilat-Asp in complex with human ACE: a molecular basis for domain-selectivity Gyles E. Cozier, Sylva L. Schwager, Rajni K. Sharma, Kelly Chibale, Edward D. Sturrock, K. Ravi Acharya
The Febs Journal, Feb 2018 DOI: 10.1111/febs.14421 Journal Paper I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structure-based optimization strategies for G protein-coupled receptor (GPCR) allosteric modulators: a case study from analyses of new metabotropic glutamate receptor 5 (mGlu5) x-ray structures John A. Christopher, Zoltán Orgován, Miles Congreve, Andrew S. Dore, James C. Errey, Fiona H. Marshall, Jonathan S. Mason, Krzysztof Okrasa, Prakash Rucktooa, Maria J. Serrano-Vega, György G. Ferenczy, Gyorgy M. Keseru
Journal Of Medicinal Chemistry, Feb 2018 DOI: 10.1021/acs.jmedchem.7b01722 Second-generation CK2α inhibitors targeting the αD pocket Jessica Iegre, Paul Brear, Claudia De Fusco, Masao Yoshida, Sophie L. Mitchell, Maxim Rossmann, Laura Carro, Hannah F. Sore, Marko Hyvonen, David R. Spring
Chemical Science, 9 Feb 2018 DOI: 10.1039/C7SC05122K Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Characterization of the fast and promiscuous macrocyclase from plant PCY1 enables the use of simple substrates Hannes Ludewig, Clarissa M. Czekster, Emilia Oueis, Elizabeth S. Munday, Mohammed Arshad, Silvia A. Synowsky, Andrew F. Bent, James H. Naismith
Acs Chemical Biology, Jan 2018 DOI: 10.1021/acschembio.8b00050 Journal Paper I04-1-Macromolecular Crystallography (fixed wavelength) I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Trapping IgE in a closed conformation by mimicking CD23 binding prevents and disrupts FcεRI interaction Frederic Jabs, Melanie Plum, Nick S. Laursen, Rasmus K. Jensen, Brian Mølgaard, Michaela Miehe, Marco Mandolesi, Michèle M. Rauber, Wolfgang Pfützner, Thilo Jakob, Christian Möbs, Gregers R. Andersen, Edzard Spillner
Nature Communications, 9 Jan 2018 DOI: 10.1038/s41467-017-02312-7 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography open access Structure of the complement C5a receptor bound to the extra-helical antagonist NDT9513727 Nathan Robertson, Mathieu Rappas, Andrew Dore, Jason Brown, Giovanni Bottegoni, Markus Koglin, Julie Cansfield, Ali Jazayeri, Robert M. Cooke, Fiona H. Marshall
Nature, 553 Jan 2018 DOI: 10.1038/nature25025 Affimer proteins inhibit immune complex binding to FcγRIIIa with high specificity through competitive and allosteric modes of action James I. Robinson, Euan W. Baxter, Robin L. Owen, Maren Thomsen, Darren C. Tomlinson, Mark P. Waterhouse, Stephanie J. Win, Joanne E. Nettleship, Christian Tiede, Richard J. Foster, Raymond J. Owens, Colin W. G. Fishwick, Sarah A. Harris, Adrian Goldman, Michael J. Mcpherson, Ann W. Morgan
Proceedings Of The National Academy Of Sciences, 115 Jan 2018 DOI: 10.1073/pnas.1707856115 The structure of FIV reverse transcriptase and its implications for non-nucleoside inhibitor resistance Meytal Galilee, Akram Alian
Plos Pathogens, 14 Jan 2018 DOI: 10.1371/journal.ppat.1006849 Journal Paper I24-Microfocus Macromolecular Crystallography open access Discovery of potent and selective MRCK inhibitors with therapeutic effect on skin cancer Mathieu Unbekandt, Simone Belshaw, Justin Bower, Maeve Clarke, Jacqueline Cordes, Diane Crighton, Daniel R. Croft, Martin J. Drysdale, Mathew J. Garnett, Kathryn Gill, Christopher Gray, David A. Greenhalgh, James A. M. Hall, Jennifer Konczal, Sergio Lilla, Duncan Mcarthur, Patricia Mcconnell, Laura Mcdonald, Lynn Mcgarry, Heather Mckinnon, Carol Mcmenemy, Mokdad Mezna, Nicholas A. Morrice, June Munro, Gregory Naylor, Nicola Rath, Alexander W. Schüttelkopf, Mairi Sime, Michael F. Olson
Cancer Research, Jan 2018 DOI: 10.1158/0008-5472.CAN-17-2870 Journal Paper I02-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography CDKL family kinases have evolved distinct structural features and ciliary function Peter Canning, Kwangjin Park, João Gonçalves, Chunmei Li, Conor J. Howard, Timothy D. Sharpe, Liam J. Holt, Laurence Pelletier, Alex N. Bullock, Michel R. Leroux
Cell Reports, 22 Jan 2018 DOI: 10.1016/j.celrep.2017.12.083 Journal Paper I02-Macromolecular Crystallography I03-Macromolecular Crystallography I04-1-Macromolecular Crystallography (fixed wavelength) I24-Microfocus Macromolecular Crystallography open access A study of the molecular regulation of trypanosomatid phosphofructokinases as drug targets James R. H. Kinkead
Jan 2018 Thesis I04-Macromolecular Crystallography I24-Microfocus Macromolecular Crystallography
Towards high throughput GPCR crystallography: In Meso soaking of Adenosine A2A Receptor crystals Prakash Rucktooa, Robert K. Y. Cheng, Elena Segala, Tian Geng, James C. Errey, Giles A. Brown, Robert M. Cooke, Fiona H. Marshall, Andrew S. Dore
Scientific Reports, 8 Jan 2018 DOI: 10.1038/s41598-017-18570-w Journal Paper I24-Microfocus Macromolecular Crystallography open access