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Macromolecular Crystallography
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In This Section

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  • I04 Manual
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      • Variable Beamsize
      • Dose-aware data collection
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Instruments by Science Group

Macromolecular
Crystallography
Soft Condensed
Matter
Imaging and
Microscopy
Biological
Cryo-Imaging
Magnetic
Materials
Structures and
Surfaces
Crystallography
Spectroscopy

I04 Contact

Beamline Phone Number:
+44 (0) 1235 778679
 

Principal Beamline Scientist:
Ralf Flaig
 
Tel: +44 (0) 1235 778412 
E-mail: [email protected]

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Science Group Leader

Dave Hall

Email: [email protected]
Tel: +44 (0) 1235 778926

I04 Microfocus MX

Status: Operational

Beamsize: 10 µm x 5 µm - 110 µm x 100 µm
Detector: Eiger2 XE 16M
Wavelength: 0.69 - 2.07 Å

Microfocus Multi-axis Goniometry Humidity Control Macromolecular Crystallography MAD: Multi Wavelength Anomalous Diffraction Remote Access X-ray Diffraction
  1. Instruments
  2. MX
  3. I04
  4. I04 Manual
  5. Understanding the I04 Beam
  6. Variable Beamsize

Beamsize

X-ray crystallography relies on the interaction of X-rays with protein crystals, where the number of unit cells contributing to Bragg diffraction directly influences the intensity of diffraction spots and, consequently, the achievable signal-to-noise ratio (I/σ) and maximum resolution. Traditionally, this drove a need for large crystals, a requirement that persists in techniques like neutron crystallography. However, the advent of high-flux X-ray beams has lessened the reliance on very large crystals in modern macromolecular crystallography. Instead, the focus has shifted towards managing crystal inhomogeneity, where variations in mosaicity and lattice deformations across a crystal can lead to differing diffraction quality in different regions. The development of stable, microfocus beams (5-50 μm, compared to older 50-200 μm beams), combined with high-speed detectors (capable of 500 Hz acquisition), and improved beam stability, allows us to selectively probe and exploit the best-diffracting regions within crystals. Furthermore, for small crystals, matching the beam size to the crystal dimensions is crucial to minimize background scatter from the sample holder, mother liquor, or air, which can significantly improve the signal-to-noise ratio (I/σ). This article will discuss the beam size capabilities at the Diamond Light Source I04 beamline and provide practical best practices for users.

Beam Size Capabilities at I04

Why is Beam Size Important?

Best Practices for Beam Size Selection

In summary, the best practices for beam size selection at I04 are:

  • Match beam size to sample size: For small crystals, this minimizes background scatter and maximizes signal.  
  • Maintain constant dose: When changing beam size, adjust the exposure to keep the delivered dose constant. Ideally, the optimal dose should be determined based on crystal quality (diffracting resolution). Consult the I04 website and our publication on dose-aware data collection for detailed recommendations.  
  • Consider crystal homogeneity: For larger, potentially inhomogeneous crystals, use a smaller beam to probe and select the best-diffracting region.  
  • Balance beam size with experimental aims: Adjust beam size to optimize data quality for specific experiment types (e.g., larger beam for phasing)

Additional Considerations

  • Remember that the available beam sizes at I04 are energy dependent. If a specific beam size is crucial, you can fine-tune the energy to achieve it.  
  • Do not hesitate to experiment with different beam sizes. The I04 system allows for quick and easy beam size changes, which can significantly improve your data.  
  • We strongly encourage all users to consult with I04 beamline staff for personalized advice on beam size and dose optimization. We are available to provide support before, during, or after your beamtime. Please check the I04 webpage for contact information and further details.
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Diamond Light Source

Diamond Light Source is the UK's national synchrotron science facility, located at the Harwell Science and Innovation Campus in Oxfordshire.

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