Diamond Home Page
  • Diamond Home Page
  • About Us
  • For Users
  • Industry
  • Public
  • Science
  • Instruments
  • Careers
  • More
Search

On this website

About Diamond

  • About Diamond
  • About Synchrotron
  • News and Features
  • Events
  • Contact Us
  • FAQ

For Users

  • Apply for beamtime
  • User guide
  • Diamond Users Commitee
  • FAQ

Industry

  • Techniques Available
  • Industry Research
  • Industry Case Studies
  • News
  • Meet the Industry Team

Science

  • Research
  • Computing
  • The Machine
  • Publications
  • Research Expertise
  • Membrane Protein Laboratory
  • Additional Facilities

Instruments

  • All the Instruments
  • Macromolecular Crystallography
  • Soft Condensed Matter
  • Imaging and Microscopy
  • Biological Cryo-Imaging
  • Magnetic Materials
  • Structures and Surfaces
  • Crystallography
  • Spectroscopy

Careers

  • Vacancies
  • Info for applicants
  • Company Benefits
  • Apprenticeships
  • PhD Studentships
  • Work Placement

Public

  • News
  • How Diamond Works
  • Multimedia
  • Features
  • Visits Us
  • For School

Procurement

  • Non-OJEU Tender Notices
  • OJEU PINs
  • OJEU Tender Notices
  • Registration Form

Software & Tools

  • Publications Database
  • iSpyB
  • User Administration System

Main Content

Soft Condensed Matter - Small Angle Scattering
Sub-navigation
  • Small Angle Scattering
  • Beginner's Guide
  • B21
  • I22
  • DL-SAXS
  • Software for SAXS
  • Staff-Research
  • Events and Conferences
  • Contacts

In This Section

Sub Navigation
  • SAXS GDA
  • SAXS Data Reduction
  • CCP13
    • BSL
    • CORFUNC
    • FD2BSL
    • FDSCALE
    • FibreFix
    • FISH
    • FTOREC
    • HELIX
    • LSQINT
    • MusLABEL
    • SAMPLE
    • XCONV
    • XFIT
    • XFIX
    • XOTOKO
    • Fibre Diffraction Review

Instruments by Science Group

Macromolecular
Crystallography
Soft Condensed
Matter
Imaging and
Microscopy
Biological
Cryo-Imaging
Magnetic
Materials
Structures and
Surfaces
Crystallography
Spectroscopy

Science Group Leader

Robert Rambo

Email: robert.rambo@diamond.ac.uk
Tel: +44 (0)1235 56 7675

  1. Instruments
  2. Soft Condensed Matter
  3. Small Angle Scattering
  4. Software for SAXS
  5. CCP13
  6. FD2BSL

FD2BSL

FD2BSL - Conversion of LSQINT output files to BSL/OTOKO format

Introduction
FD2BSL performs the conversion from the ASCII LSQINT (or FDSCALE) output files to BSL/OTOKO format allowing flexibility in the output image dimensions and I/SIGMA(I) cutoffs for intensity rejection. The output file has one raster per layer line and a user-defined number of pixels per raster. For Bragg-sampled data, the intensity of a reflection is divided by its multiplicity so that a representation of the cylindrical average of the squared molecular transform is given.

Keywords
Keyworded input can be either upper or lower case. Only the first four characters of the keyword are required (and read). When values are input, they can take integer, real or exponent fields. Comments are signalled by ! and can occur anywhere on a line. Up to five continuation lines are allowed using & at the end of the current line. Lines must be less than 132 characters. Descriptions of the keywords recognised by FD2BSL are given below.
(Sub-keywords are indented on the line following the main keyword)

FILE - the program will now prompt for an input filename

PIXEls - one value to follow, the number of pixels in the BSL output file

RASTers - one value to follow, the number of rasters in the output BSL file
(N.B. The above two keywords can appear on the same line in any order)
(defaults: PIXELS 128 RASTERS (number of input layerlines))

RESOlution - two values to follow, the minimum and maximum d-spacings to be transformed
(Defaults: RESOLUTION 0.0 (max. resolution in dataset))

SIGMa - one value to follow, the minimum standard deviation for inclusion in the BSL output file
(Default: SIGMA 1.5)

RUN - begin transformation

  • Contact Us
  • About Diamond Light Source
  • Careers
  • Procurement
  • Legal notices & Cookie policy
  • Supply Chain Transparency

Diamond Light Source

Diamond Light Source is the UK's national synchrotron science facility, located at the Harwell Science and Innovation Campus in Oxfordshire.

Copyright © 2022 Diamond Light Source

 

Diamond Light Source Ltd
Diamond House
Harwell Science & Innovation Campus
Didcot
Oxfordshire
OX11 0DE

See on Google Maps

Diamond Light Source® and the Diamond logo are registered trademarks of Diamond Light Source Ltd

Registered in England and Wales at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom. Company number: 4375679. VAT number: 287 461 957. Economic Operators Registration and Identification (EORI) number: GB287461957003.

feedback